Center for Reproducible Biomedical Modeling
The Center for Reproducible Biomedical Modeling is an academic research center that aims to enable larger and more accurate systems biology models, as well as their applications to science, bioengineering, and medicine, by enhancing their understandability, reusability, and reproducibility.
2025 Kinetic Modeling Virtual Course - Day 2
2025 Kinetic Modeling Virtual Course | Day 1 - Part 1
2025 Kinetic Modeling Virtual Course | Day 1 - Part 2
Inference of Large-Scale Boolean Models from Human-Curated Fully Annotated Process Description Diag.
On Steroids! Modeling 11-Oxygenated Androgen Levels in Chronic Kidney Disease
Improving Reuse with Continuous Scientific Processes
Using Bond Graphs to Ensure Thermodynamic Consistency in Biophysical Models
2024 Summer School - Day 5.1 Developing Multiscale Models of Microbes, Infection and Disease
2024 Summer School - Day 5.2 - pyPESTO – A Modular and Scalable Tool for Parameter Estimation
2024 Summer School - Day 5.3 - Towards Digital Twins of Acute Myeloid Leukemia Patients
2024 Summer School - Day 5.5 - Coupling Chemical Network Models to Cell Tissue Models
2024 Summer School - Day 5.4 -
2024 Summer School & Hackathon - Day 4 - Model Credibility Hackathon
2024 Summer School & Hackathon - Day 3.1 - An Overview of Model Calibration and Parameter Estimation
2024 Summer School & Hackathon - Day 3.2 - Oscillators and Signaling Pathways
2024 Summer School & Hackathon - Day 3.3 - Model Annotation
2024 Summer School & Hackathon - Day 2.4 - Studying Bistability
2024 Summer School & Hackathon - Day 2.3 Advanced Antimony
2024 Summer School & Hackathon - Day 2.2 - SBML and Biomodels
2024 Summer School & Hackathon - Day 2.1 - Introduction to Tellurium (Part 2)
2024 Summer School & Hackathon - Day 1.4 Introduction to Tellurium
2024 Summer School & Hackathon - Day 1.2 Introduction to Modeling
2024 Summer School & Hackathon - Day 1.3 Introduction to Antimony
2024 Summer School & Hackathon - Day 1.1 Welcome and Introduction to Python
pyPESTO: A Modular and Scalable Tool for Parameter Estimation for Dynamic Models - Paul Jost
Reproducibility and FAIR Principles: The Case of a Segment Polarity Network Model - Pedro Mendes
Multiscale Multicellular Modeling Challenges and Opportunities
2023 Kinetic Modeling Virtual Course - Part 5: Metabolic Control Analysis - Herbert Sauro
2023 Kinetic Modeling Virtual Course & Hackathon: Part 1 & 2 - Herbert Sauro & Michael Kochen
2023 Kinetic Modeling Virtual Course & Hackathon - Part 3: Parameter Fittings - Joseph Hellerstein