Genome Assembly Tutorial - Nanopore LONG READS(ONT) with Flye | Bioinformatics - Beginner Level
Автор: Bioinformatics Coach
Загружено: 2021-11-13
Просмотров: 10389
Genome assembly of oxford nanopore reads(ONT) using Flye
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Software installation instructions
Install Anaconda in Linux
• Install , Configure and Run Anaconda in a...
Flye
https://github.com/fenderglass/Flye
Porechop
https://github.com/rrwick/Porechop#bu...
Where to search and download the data
https://www.ncbi.nlm.nih.gov/sra
Article from which the data was obtained
https://www.ncbi.nlm.nih.gov/pmc/arti...
Sections of the video
00:00 Introduction
00:21 Overview of the tutorial
01:01 PC Requirement
02:22 Source of data for this tutorial
02:49 Download the data
06:39 Installing the tools for this tutorial
10:56 Trimming the data
14:45 Assemble the reads using flye
19:44 Explore the output files
23:33 Post-Genome Assembly Analysis
LONG READ (ONT) Genome Assembly Tutorial with Flye | Bioinformatics 101 for Beginners
How I perform Genome Assembly on ONT reads using Flye | Bioinformatics for Beginners
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