Tutorial: How to Model a 5Å Active Site in ChimeraX
Автор: BioMolViz Group
Загружено: 2022-01-05
Просмотров: 9350
A supporting video for our JoVE manuscript, available now at:
https://www.jove.com/t/63170/modeling...
Procko, K., Bakheet, S., Beckham, J. T., Franzen, M. A., Jakubowski, H., & Novak, W. R. (2021). Modeling an Enzyme Active Site using Molecular Visualization Freeware. Journal of visualized experiments: JoVE, (178).
• PDB ID 3FGU: https://www.rcsb.org/structure/3FGU
• Petit, Pierre, Mathias Antoine, Gilles Ferry, Jean A. Boutin, Amandine Lagarde, Laure Gluais, Renaud Vincentelli, and Laurent Vuillard. "The active conformation of human glucokinase is not altered by allosteric activators." Acta Crystallographica Section D: Biological Crystallography 67, no. 11 (2011): 929-935.
• Wang J, Youkharibache P, Zhang D, Lanczycki CJ, Geer RC, Madej T, Phan L, Ward M, Lu S, Marchler GH, Wang Y, Bryant SH, Geer LY, Marchler-Bauer A. iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures. Bioinformatics. 2020 Jan 1;36(1):131-135. doi: 10.1093/bioinformatics/btz502. PMID: 31218344; PMCID: PMC6956771.
• https://www.ncbi.nlm.nih.gov/Structur...
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