EP 4 | MULTIPLE LIGAND DOCKING in Windows with Open Babel, AutoDock Vina and UCSF Chimera
Автор: Learn-at-ease
Загружено: 2022-09-05
Просмотров: 6021
Hi,
I am Dr. Dweipayan Goswami,
Welcome to my YouTube channel "Learn at ease"
I will be uploading animated videos related to biochemistry for the Under Graduates and Graduates purely based on the information form the traditional text books
I will also upload videos in the subjects of Microbiology, Biotechnology, Immunology etc.
If you like the concept, please subscribe to my channel 'LEARN AT EASE'
GitHub link for codes and Python Script : https://github.com/DweipayanG/Multipl...
Time stamp
Downloading protein and ligand : 0:03
Preparing files in UCSF CHIMERA : 4:00
Preparing Grid-BOX in UCSF CHIMERA : 9:30
Making .pdbqt files : 14:30
Prep for Multiple docking : 19:30
WSL install : 24:00
Updating WSL and installing Open Babble and Auto Dock Vina : 30:30
Multiple ligand docking : 34:00
Validating docking by redocking results : 48:00
Preparing docked files as output .pdb file: 50:00
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